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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51793.1Putative oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (224 aa)    
Predicted Functional Partners:
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
  0.844
EAR51792.1
COG0765 ABC-type amino acid transport system, permease component.
       0.773
EAR51791.1
Putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
       0.588
EAR51789.1
Hypothetical protein; COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
  
    0.520
EAR51785.1
Putative sugar uptake ABC transporter permease protein; COG1175 ABC-type sugar transport systems, permease components.
       0.518
EAR51786.1
Putative sugar uptake ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
       0.518
EAR51787.1
Hypothetical protein; COG3408 Glycogen debranching enzyme.
       0.518
EAR51788.1
Putative transcriptional regulator, lacI family protein; COG1609 Transcriptional regulators.
       0.518
EAR51790.1
Putative beta-galactosidase protein; COG1874 Beta-galactosidase.
       0.518
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.476
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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