STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51796.1COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. (343 aa)    
Predicted Functional Partners:
EAR50507.1
Hydrolase, UxaA family protein; COG2721 Altronate dehydratase.
    
 0.875
EAR50515.1
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.870
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.869
EAR53058.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
 0.810
EAR52034.1
Malate dehydrogenase; COG0281 Malic enzyme.
    
 0.810
EAR51794.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
   
 0.701
EAR51795.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
   
 0.693
EAR50693.1
COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization.
 
  
  0.565
EAR51282.1
Hypothetical protein; COG1802 Transcriptional regulators; Belongs to the LDH2/MDH2 oxidoreductase family.
  
  
 
0.544
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
    0.543
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.