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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51801.1Glucokinase; COG0529 Adenylylsulfate kinase and related kinases. (183 aa)    
Predicted Functional Partners:
EAR51802.1
Glucokinase; COG1940 Transcriptional regulator/sugar kinase.
      0.974
EAR51803.1
COG3684 Tagatose-1,6-bisphosphate aldolase.
       0.805
EAR52507.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.758
EAR51800.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.732
EAR51799.1
COG1802 Transcriptional regulators.
       0.538
EAR51804.1
COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.
       0.515
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
  0.499
EAR50658.1
Membrane protein, putative.
     
 0.420
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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