close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51806.1Ribose ABC transporter, permease protein; COG4158 Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (337 aa)    
Predicted Functional Partners:
EAR51805.1
Ribose ABC transporter, periplasmic binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
  0.996
EAR51807.1
ABC-transport system ATP binding protein; COG1129 ABC-type sugar transport system, ATPase component.
  0.974
EAR52568.1
ABC sugar transporter, periplasmic ligand binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.973
rbsA
ABC sugar transporter, ATPase subunit protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.907
EAR50172.1
Putative ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
 
  0.905
rbsA-2
Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.904
EAR52528.1
ATP-binding protein of ribose ABC transporter; COG1129 ABC-type sugar transport system, ATPase component.
 
  0.901
EAR51946.1
COG1129 ABC-type sugar transport system, ATPase component.
 
  0.889
EAR53032.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.888
EAR50173.1
ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; COG1879 ABC-type sugar transport system, periplasmic component.
  
  0.877
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.