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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51809.1Glucose-methanol-choline oxidoreductase:FAD dependent oxidoreductase:GMC oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins. (560 aa)    
Predicted Functional Partners:
EAR51065.1
TdcF protein; COG2010 Cytochrome c, mono- and diheme variants.
 
   0.934
EAR51533.1
COG2010 Cytochrome c, mono- and diheme variants.
   
   0.921
EAR51015.1
COG2010 Cytochrome c, mono- and diheme variants.
   
   0.921
EAR51247.1
Hypothetical protein; COG0457 FOG: TPR repeat.
    
 0.850
EAR52756.1
Hypothetical protein.
    
  0.826
EAR51754.1
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
  0.826
EAR51413.1
Hypothetical protein.
    
  0.826
EAR50356.1
TPR domain protein; COG0457 FOG: TPR repeat.
    
  0.826
EAR51376.1
Putative aromatic-ring hydroxylating dioxygenase, alpha-subunit; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
    
 0.806
EAR51808.1
COG4221 Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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