STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49995.1Hypothetical protein. (304 aa)    
Predicted Functional Partners:
EAR49994.1
COG5488 Integral membrane protein.
       0.793
EAR52455.1
Diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 
 0.790
EAR51247.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.784
EAR51607.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
  
  
  0.776
EAR51608.1
Predicted glycosyltransferase.
  
     0.774
EAR51413.1
Hypothetical protein.
 
 
   0.764
EAR51754.1
Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
   0.731
EAR50356.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
   0.731
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
  
  
 0.694
EAR52756.1
Hypothetical protein.
   
   0.671
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.