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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52309.1COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (288 aa)    
Predicted Functional Partners:
EAR52308.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; Belongs to the UbiA prenyltransferase family.
   
   0.834
EAR52310.1
COG3847 Flp pilus assembly protein, pilin Flp.
 
    0.657
EAR50741.1
H+-transporting two-sector ATPase, alpha/beta subunit; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
    0.570
EAR51725.1
Flagellum-specific ATP synthase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
    0.569
EAR52320.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
     0.495
EAR49938.1
COG0388 Predicted amidohydrolase.
   
    0.491
EAR52315.1
ATPase, putative.
 
     0.489
EAR52322.1
Hypothetical protein.
 
     0.485
EAR52317.1
Type II/IV secretion system protein, TadA subfamily protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
  
    0.484
EAR52321.1
Lipoprotein, putative; COG0457 FOG: TPR repeat.
 
     0.468
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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