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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52346.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
prmA
Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.730
EAR52478.1
Hypothetical protein.
  
     0.632
EAR49781.1
Hypothetical protein.
  
     0.613
EAR53010.1
Translocase.
  
     0.579
EAR50412.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
     0.576
EAR49499.1
Hypothetical protein; COG1151 6Fe-6S prismane cluster-containing protein.
  
     0.564
EAR52348.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.542
EAR51340.1
Tellurite resistance protein; COG0004 Ammonia permease.
  
     0.529
EAR51583.1
Hypothetical protein.
  
     0.516
EAR52122.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.