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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (554 aa)    
Predicted Functional Partners:
hutH
COG2986 Histidine ammonia-lyase.
 
 0.999
hutI
COG1228 Imidazolonepropionase and related amidohydrolases; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 0.999
EAR52699.1
Hypothetical protein; COG1228 Imidazolonepropionase and related amidohydrolases.
  
 
 0.929
EAR52355.1
Transcriptional regulator, GntR family protein; COG2188 Transcriptional regulators.
 
  
 0.775
EAR52351.1
COG3741 N-formylglutamate amidohydrolase.
 
  
 0.774
EAR52354.1
Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
 
  
 0.714
EAR50705.1
Hypothetical protein; COG3741 N-formylglutamate amidohydrolase.
  
  
 0.538
EAR52348.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.465
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.461
EAR50231.1
COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
  
 0.427
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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