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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52386.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
EAR52388.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
     0.980
EAR52385.1
Hypothetical protein.
 
     0.962
EAR52389.1
Hypothetical protein.
 
     0.946
EAR52384.1
Hypothetical protein.
 
     0.924
EAR52390.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
     0.922
EAR52387.1
Hypothetical protein.
       0.705
EAR51490.1
Hypothetical protein.
  
     0.679
EAR52004.1
Hypothetical protein; COG2823 Predicted periplasmic or secreted lipoprotein.
  
     0.596
EAR50371.1
Hypothetical protein.
  
     0.527
EAR53114.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.