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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52403.1Sugar ABC transporter, permease protein; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (376 aa)    
Predicted Functional Partners:
EAR52402.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
  0.985
EAR52404.1
Sugar ABC transporter, permease protein; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.984
EAR50447.1
ABC transporter, inner membrane subunit; COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.958
EAR52400.1
COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
  0.956
EAR52709.1
Putative sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
  0.934
EAR51933.1
Sugar ABC transporter ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
  0.934
EAR50445.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
  0.932
EAR52708.1
Putative lipoprotein; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
  0.909
EAR51932.1
COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
  0.909
EAR50448.1
Bmp family protein; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
  0.907
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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