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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52445.1SacC; COG0665 Glycine/D-amino acid oxidases (deaminating). (539 aa)    
Predicted Functional Partners:
EAR49843.1
Putative Fructokinase; COG0524 Sugar kinases, ribokinase family.
 
 0.892
EAR52444.1
Oxidoreductase, FAD-binding; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.830
EAR50509.1
D-mannonate oxidoreductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
     
 0.611
EAR50224.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
     
 0.611
EAR52443.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.594
EAR52541.1
Putative trehalose synthase; COG0366 Glycosidases.
  
 
 0.499
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.435
EAR51959.1
Rhamnosidase A.
  
     0.434
EAR49569.1
Carbohydrate kinase, PfkB; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
  
   
 0.422
EAR52257.1
Probable alpha-glucosidase protein; COG0366 Glycosidases.
 
 
 0.421
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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