rpmH protein (Oceanicola granulosus) - STRING interaction network

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Score

rpmH

COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpoC

0.998

rpsN

0.997

rpmJ

0.997

rpsT

0.997

rpmB

0.997

rpmF

0.996

rpsI

0.996

rplM

0.996

rplQ

0.996

rplX

0.996

Your Current Organism:

Oceanicola granulosus

NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplQ	OG2516_03153	OG2516_08336	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0203 Ribosomal protein L17.	0.998
rplM	rplX	OG2516_03153	OG2516_08426	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplM	rpmB	OG2516_03153	OG2516_17061	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmF	OG2516_03153	OG2516_00195	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplM	rpmH	OG2516_03153	OG2516_08237	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.996
rplM	rpmJ	OG2516_03153	OG2516_09894	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.997
rplM	rpoC	OG2516_03153	OG2516_08541	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplM	rpsI	OG2516_03153	OG2516_03148	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsN	OG2516_03153	OG2516_08416	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplM	rpsT	OG2516_03153	OG2516_10129	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.998
rplQ	rplM	OG2516_08336	OG2516_03153	COG0203 Ribosomal protein L17.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
rplQ	rplX	OG2516_08336	OG2516_08426	COG0203 Ribosomal protein L17.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.998
rplQ	rpmB	OG2516_08336	OG2516_17061	COG0203 Ribosomal protein L17.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplQ	rpmF	OG2516_08336	OG2516_00195	COG0203 Ribosomal protein L17.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplQ	rpmH	OG2516_08336	OG2516_08237	COG0203 Ribosomal protein L17.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.996
rplQ	rpmJ	OG2516_08336	OG2516_09894	COG0203 Ribosomal protein L17.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.998
rplQ	rpoC	OG2516_08336	OG2516_08541	COG0203 Ribosomal protein L17.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplQ	rpsI	OG2516_08336	OG2516_03148	COG0203 Ribosomal protein L17.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplQ	rpsN	OG2516_08336	OG2516_08416	COG0203 Ribosomal protein L17.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.997
rplQ	rpsT	OG2516_08336	OG2516_10129	COG0203 Ribosomal protein L17.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996

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