STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49808.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
EAR49809.1
ATP:cob(I)alamin adenosyltransferase, putative; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.856
EAR49807.1
Oxidoreductase, short-chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.746
EAR49881.1
Hypothetical protein.
  
     0.696
EAR52819.1
Hypothetical protein; COG3926 Putative secretion activating protein.
  
     0.691
EAR49811.1
COG2025 Electron transfer flavoprotein, alpha subunit.
       0.666
EAR49810.1
COG2086 Electron transfer flavoprotein, beta subunit.
       0.664
EAR49633.1
Cytochrome C oxidase assembly protein.
  
     0.642
EAR49677.1
Hypothetical protein.
  
     0.512
EAR52801.1
D-fructose-6-phosphate amidotransferase.
  
     0.470
EAR51455.1
COG3917 2-hydroxychromene-2-carboxylate isomerase.
  
     0.449
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.