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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49811.1COG2025 Electron transfer flavoprotein, alpha subunit. (307 aa)    
Predicted Functional Partners:
EAR49810.1
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
EAR50357.1
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
EAR51177.1
COG1960 Acyl-CoA dehydrogenases.
 0.998
EAR52096.1
COG1960 Acyl-CoA dehydrogenases.
 0.998
EAR51604.1
Putative glutaryl-CoA dehydrogenase protein; COG1960 Acyl-CoA dehydrogenases.
 0.997
EAR50369.1
COG1960 Acyl-CoA dehydrogenases.
 0.992
EAR50908.1
COG1960 Acyl-CoA dehydrogenases.
 0.988
EAR50271.1
COG1960 Acyl-CoA dehydrogenases.
  
 0.972
EAR50986.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.963
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
    0.906
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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