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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50441.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
EAR50440.1
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.885
EAR50438.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.851
EAR50439.1
Peptide/opine/nickel uptake family ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
     0.790
EAR49748.1
Transcriptional regulator, GntR family protein; COG2186 Transcriptional regulators.
 
     0.766
EAR50437.1
Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
     0.736
EAR52671.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.519
EAR50442.1
COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
       0.401
EAR50443.1
COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B.
       0.401
EAR50444.1
COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
       0.401
EAR50445.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.401
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.