STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50444.1COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family. (247 aa)    
Predicted Functional Partners:
EAR50443.1
COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B.
  
 0.996
EAR50442.1
COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
  
 0.980
EAR50445.1
Sugar ABC transporter, ATP-binding protein; COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.799
EAR50685.1
COG2351 Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.795
EAR50446.1
Sugar ABC transporter, permease protein; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.786
EAR50448.1
Bmp family protein; COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
     0.776
EAR50684.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
 
  
  0.771
EAR50687.1
Membrane protein, putative; COG3748 Predicted membrane protein.
 
     0.753
EAR50882.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
    0.747
EAR50570.1
Hypothetical protein.
  
 
 0.703
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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