STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49595.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
EAR49596.1
Alcohol dehydrogenase, zinc-containing; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
   0.943
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
    
 0.828
EAR50749.1
2-polyprenylphenol 6-hydroxylase; COG0661 Predicted unusual protein kinase.
   
 
 0.769
rpsU
COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.699
EAR49597.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
       0.693
EAR49598.1
Hypothetical protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.693
EAR49968.1
Hypothetical protein.
  
     0.640
EAR52012.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
     0.638
EAR51723.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.622
EAR50814.1
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
     0.615
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.