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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50816.1Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases. (467 aa)    
Predicted Functional Partners:
EAR51450.1
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
 0.865
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.797
EAR50022.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
   0.747
EAR52299.1
Formate dehydrogenase, beta subunit; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
   
   0.747
EAR49927.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
 
 0.740
EAR49928.1
Putative glycolate oxidase subunit protein; COG0277 FAD/FMN-containing dehydrogenases.
  
 
0.725
EAR49811.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.721
EAR53058.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
 
 0.716
EAR52034.1
Malate dehydrogenase; COG0281 Malic enzyme.
  
 
 0.716
EAR49810.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.701
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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