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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50830.1ABC peptide transporter, inner membrane subunit; COG4174 ABC-type uncharacterized transport system, permease component. (357 aa)    
Predicted Functional Partners:
EAR50829.1
Oligopeptide/dipeptide uptake family ABC transporter, permease protein; COG4239 ABC-type uncharacterized transport system, permease component.
 
  
 0.991
EAR50831.1
ABC peptide transporter, substrate binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 0.932
EAR50554.1
Putative oligopeptide ABC transporter, periplasmic-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 0.864
EAR50827.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.861
EAR52975.1
Putative ABC transporter ATP-binding protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
 0.828
EAR52147.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
 
 0.725
EAR50250.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.476
EAR52655.1
ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
     0.474
EAR52645.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.459
EAR52729.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.451
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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