STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50507.1Hydrolase, UxaA family protein; COG2721 Altronate dehydratase. (492 aa)    
Predicted Functional Partners:
EAR50509.1
D-mannonate oxidoreductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
 0.994
EAR50508.1
COG1904 Glucuronate isomerase.
  
 0.967
EAR50506.1
2-dehydro-3-deoxygluconokinase; COG0524 Sugar kinases, ribokinase family.
 
  
 0.963
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.953
EAR50224.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
 0.883
EAR51796.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.875
EAR52544.1
2-dehydro-3-deoxygluconokinase; COG0524 Sugar kinases, ribokinase family.
 
  
 0.841
EAR51243.1
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseoxidoreductase protein; COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  0.765
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.616
EAR50511.1
Nitroreductase family protein; COG0778 Nitroreductase.
       0.616
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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