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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50508.1COG1904 Glucuronate isomerase. (467 aa)    
Predicted Functional Partners:
EAR50509.1
D-mannonate oxidoreductase; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.995
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.979
EAR50507.1
Hydrolase, UxaA family protein; COG2721 Altronate dehydratase.
  
 0.967
EAR50224.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.923
EAR50161.1
Probable beta-galactosidase protein; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.877
EAR50506.1
2-dehydro-3-deoxygluconokinase; COG0524 Sugar kinases, ribokinase family.
 
   
 0.844
EAR49481.1
Putative beta-xylosidase protein; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.745
EAR49540.1
Putative beta-xylosidase protein; COG3507 Beta-xylosidase.
    
 0.745
EAR52142.1
Probable transmembrane protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
    
 0.723
EAR51062.1
Hypothetical protein; COG3534 Alpha-L-arabinofuranosidase.
     
 0.692
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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