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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50513.1Aspartate-semialdehyde dehydrogenase; COG3668 Plasmid stabilization system protein. (213 aa)    
Predicted Functional Partners:
EAR51038.1
Possible DNA-binding protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
 
     0.728
EAR49379.1
Possible DNA-binding protein.
 
     0.728
EAR52951.1
Hypothetical protein; COG2370 Hydrogenase/urease accessory protein.
  
     0.644
EAR53126.1
Putative glycosyltransferase protein; COG0438 Glycosyltransferase.
  
     0.644
EAR51530.1
IS 426 transposase; COG2963 Transposase and inactivated derivatives.
  
     0.624
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.596
EAR50511.1
Nitroreductase family protein; COG0778 Nitroreductase.
       0.596
EAR50512.1
malonyl-CoA synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.596
EAR53127.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
     0.578
asd
Putative aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.574
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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