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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50523.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
EAR49780.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
     0.768
EAR51495.1
Hypothetical protein.
  
     0.747
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.704
EAR50953.1
Hypothetical protein.
  
     0.693
EAR49661.1
Hypothetical protein.
 
     0.689
EAR50019.1
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.665
EAR50657.1
COG3064 Membrane protein involved in colicin uptake.
  
     0.660
EAR49923.1
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.654
EAR50010.1
Hypothetical protein; COG3773 Cell wall hydrolyses involved in spore germination.
  
     0.646
EAR50870.1
2'-deoxycytidine 5'-triphosphate deaminase; COG0717 Deoxycytidine deaminase.
  
     0.624
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.