STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52850.1Putative cyclopropane/cyclopropene fatty acid synthesis protein. (250 aa)    
Predicted Functional Partners:
EAR52849.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
  
 0.993
EAR51339.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
  
 0.983
EAR49543.1
Cfa, cyclopropane-fatty-acyl-phospholipid synthase; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
  
 0.965
EAR52847.1
COG3806 Anti-sigma factor.
 
  
 0.939
EAR52848.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.878
EAR52855.1
Short-chain dehydrogenase/reductase family member; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
 0.829
EAR52607.1
Putative GPH family sugar transporter; COG2211 Na+/melibiose symporter and related transporters.
  
  
 0.575
EAR51338.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.568
EAR52155.1
COG4852 Predicted membrane protein.
 
     0.465
EAR52627.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.421
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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