STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
queG4Fe-4S ferredoxin, iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (345 aa)    
Predicted Functional Partners:
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
  
 0.838
EAR53058.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
  0.836
EAR52034.1
Malate dehydrogenase; COG0281 Malic enzyme.
    
  0.836
EAR49915.1
Possible O6-methylguanine-DNA methyltransferase; COG2207 AraC-type DNA-binding domain-containing proteins.
      0.732
EAR52864.1
COG0625 Glutathione S-transferase.
       0.718
EAR52861.1
Hypothetical protein.
       0.680
EAR52862.1
COG2133 Glucose/sorbosone dehydrogenases.
       0.662
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.634
EAR52866.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
       0.540
EAR52860.1
Putative transporter, RarD family, DMT superfamily protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.480
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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