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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52875.1Putative sugar uptake ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (354 aa)    
Predicted Functional Partners:
EAR52876.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.904
EAR52877.1
Putative sugar uptake ABC transporter permease protein; COG1175 ABC-type sugar transport systems, permease components.
 
  0.902
EAR52147.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component.
 
     
0.877
malE
Periplasmic maltose-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
  0.794
EAR50263.1
Maltose transport inner membrane protein; COG3833 ABC-type maltose transport systems, permease component.
  
  0.788
EAR52878.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.735
EAR52874.1
COG3533 Uncharacterized protein conserved in bacteria.
       0.697
EAR51910.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.632
EAR51288.1
ABC transporter, permease protein, MalFG family protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.606
EAR51313.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.578
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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