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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52886.1Hypothetical protein; COG0662 Mannose-6-phosphate isomerase. (322 aa)    
Predicted Functional Partners:
EAR52884.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
 
     0.927
EAR52887.1
Hypothetical protein.
 
     0.897
EAR52890.1
Hypothetical protein; COG5485 Predicted ester cyclase.
 
     0.893
EAR52892.1
Hypothetical protein; COG5485 Predicted ester cyclase.
 
     0.886
EAR52885.1
Hydrolase, alpha/beta fold family protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.884
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.866
EAR52893.1
ABC transporter, permease protein, MalFG family protein; COG0395 ABC-type sugar transport system, permease component.
 
     0.864
EAR52894.1
ABC transporter, membrane spanning protein; COG1175 ABC-type sugar transport systems, permease components.
 
     0.864
EAR52888.1
COG1609 Transcriptional regulators.
 
     0.859
EAR52889.1
2-keto-3-deoxygluconate oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.848
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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