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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52904.1COG4143 ABC-type thiamine transport system, periplasmic component. (327 aa)    
Predicted Functional Partners:
EAR52906.1
COG3840 ABC-type thiamine transport system, ATPase component.
 
 
  0.998
thiP
Thiamin ABC transporter membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.997
EAR52639.1
Putative iron(III) ABC transporter, fused inner membrane subunits; COG1178 ABC-type Fe3+ transport system, permease component.
  
 
  0.625
EAR52752.1
Hypothetical protein; COG1178 ABC-type Fe3+ transport system, permease component.
  
 
  0.625
EAR52907.1
Hypothetical protein.
       0.564
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.557
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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