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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52921.1Lipolytic enzyme, G-D-S-L; COG2755 Lysophospholipase L1 and related esterases. (212 aa)    
Predicted Functional Partners:
EAR49404.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
   
 0.874
EAR50915.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.874
EAR52548.1
Hypothetical protein.
  
 0.837
EAR51082.1
Hypothetical protein.
   
 0.811
EAR49872.1
Hypothetical protein.
   
  0.727
EAR50412.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
 
  0.637
EAR52920.1
COG3118 Thioredoxin domain-containing protein.
       0.538
EAR50584.1
Type I secretion target repeat protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP).
    
  0.531
EAR49472.1
Hypothetical protein.
    
  0.531
EAR52493.1
Hypothetical protein.
    
  0.531
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.