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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52922.1Selenide, water dikinase, putative; COG1252 NADH dehydrogenase, FAD-containing subunit. (713 aa)    
Predicted Functional Partners:
EAR49390.1
COG0492 Thioredoxin reductase.
    
 0.884
EAR50022.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
     
 0.858
EAR52299.1
Formate dehydrogenase, beta subunit; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
     
 0.858
EAR52925.1
Putative ABC transporter, fused inner membrane subunits; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.844
EAR52924.1
Hypothetical protein; COG5621 Predicted secreted hydrolase.
 
     0.836
EAR50533.1
Hypothetical protein; COG2603 Predicted ATPase; Belongs to the SelU family.
     0.805
EAR52926.1
ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.802
EAR52923.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; COG0480 Translation elongation factors (GTPases).
       0.778
EAR51649.1
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
  0.767
EAR51387.1
Hypothetical protein; COG0520 Selenocysteine lyase.
    
  0.767
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.