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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52936.1Glycosyl transferase, family 51; COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC. (678 aa)    
Predicted Functional Partners:
EAR52935.1
Hypothetical protein; COG2373 Large extracellular alpha-helical protein.
   
 0.973
EAR50395.1
Penicillin-binding protein 1A; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.875
EAR49673.1
Glycosyl transferase, family 51; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
 
0.871
EAR52937.1
Membrane protein, putative; COG2270 Permeases of the major facilitator superfamily.
       0.576
EAR52934.1
Membrane protein, putative; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
    0.539
mepA
Penicillin-insensitive murein endopeptidase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.503
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
   
    0.491
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 
0.480
EAR52859.1
Pyrazinamidase/nicotinamidase; COG1335 Amidases related to nicotinamidase.
   
    0.473
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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