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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52946.1COG5469 Predicted metal-binding protein. (120 aa)    
Predicted Functional Partners:
EAR52947.1
Cobalamin biosynthetic protein CobC; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
     0.868
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.831
EAR49585.1
CobL, precorrin-6Y C5,15-methyltransferase; COG2241 Precorrin-6B methylase 1.
 
     0.745
EAR49583.1
Precorrin-3B C17-methyltransferase region protein; COG2073 Cobalamin biosynthesis protein CbiG.
 
     0.733
EAR52952.1
Cobw protein; COG0523 Putative GTPases (G3E family).
 
    0.707
EAR49587.1
Hypothetical protein.
  
     0.663
EAR52955.1
COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
     0.645
EAR52949.1
Hypothetical protein; COG2951 Membrane-bound lytic murein transglycosylase B.
       0.627
EAR51273.1
Hypothetical protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.562
EAR49584.1
COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
 
     0.556
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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