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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52956.1COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (708 aa)    
Predicted Functional Partners:
EAR49649.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.999
EAR52587.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
 0.996
EAR50114.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
 0.996
EAR49452.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.983
EAR52055.1
Putative glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.969
EAR51185.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.962
EAR50713.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.961
EAR51478.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.954
EAR52575.1
Hypothetical protein; COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
  
 
 0.933
EAR50277.1
Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.918
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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