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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52965.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
EAR52966.1
Amidase, hydantoinase/carbamoylase family protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.773
EAR52964.1
N-carbamoyl-L-amino acid amidohydrolase.
       0.561
EAR52967.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
       0.527
EAR52962.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
       0.495
EAR52963.1
Dihydropyrimidinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.495
EAR52968.1
Sensor histidine kinase; COG2203 FOG: GAF domain.
       0.432
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.