close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52974.1Probable alpha-galactosidase (melibiase) protein; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases. (453 aa)    
Predicted Functional Partners:
EAR52972.1
Hypothetical protein; COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
 
  
 
0.884
EAR51790.1
Putative beta-galactosidase protein; COG1874 Beta-galactosidase.
 
  
  0.881
EAR52973.1
Tryptophan halogenase.
       0.773
EAR52975.1
Putative ABC transporter ATP-binding protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
       0.773
EAR51147.1
Hypothetical protein; COG1874 Beta-galactosidase.
 
  
  0.763
EAR51837.1
Hypothetical protein; COG1874 Beta-galactosidase.
 
  
  0.760
EAR52978.1
Alpha-galactoside ABC transporter periplasmic solute-binding protein precursor; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
     0.674
EAR52880.1
Putative exported oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
  
  
  0.656
EAR50387.1
COG3828 Uncharacterized protein conserved in bacteria.
  
  
  0.651
EAR52879.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
     0.640
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.