STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52977.1Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (341 aa)    
Predicted Functional Partners:
EAR52976.1
Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.967
EAR52978.1
Alpha-galactoside ABC transporter periplasmic solute-binding protein precursor; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.929
EAR50438.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.875
EAR52671.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.867
EAR52729.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.853
EAR52645.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.850
EAR52743.1
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.848
EAR51880.1
Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.843
EAR51841.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 
  0.841
EAR51043.1
Probable ABC-transport protein, inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.835
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.