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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR53016.1Photosynthetic apparatus regulatory protein RegA; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (183 aa)    
Predicted Functional Partners:
EAR53018.1
COG0642 Signal transduction histidine kinase.
 
 0.993
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 0.947
EAR50849.1
COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
   
 0.927
EAR51560.1
Two-component sensor histidine kinase; COG2203 FOG: GAF domain.
   
 0.926
EAR51016.1
PAS sensor Signal Tranduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
    
 0.926
EAR49853.1
Signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.913
EAR53017.1
PrrC; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
  
  
 0.851
EAR51152.1
Hypothetical protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.842
EAR52102.1
Response regulator/sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.778
EAR53033.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
 
 
 0.774
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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