Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR53035.1COG0477 Permeases of the major facilitator superfamily. (405 aa)    
Predicted Functional Partners:
hslU
ATP-dependent protease ATP-binding subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
       0.667
EAR50963.1
Metallopeptidase, family M24; COG0006 Xaa-Pro aminopeptidase.
  
     0.462
EAR53033.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
     
 0.460
EAR49873.1
Hypothetical protein.
  
     0.456
EAR51113.1
Sodium/calcium exchanger membrane region protein; COG0530 Ca2+/Na+ antiporter.
  
     0.436
EAR52231.1
Sodium/calcium exchanger membrane region protein; COG0530 Ca2+/Na+ antiporter.
  
     0.401
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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