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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR53038.1Transporter, Tim44 family protein; COG4395 Uncharacterized protein conserved in bacteria. (220 aa)    
Predicted Functional Partners:
EAR53036.1
Putative Smr; COG2840 Uncharacterized protein conserved in bacteria.
 
     0.874
EAR53037.1
MltA/3D domain protein; COG2821 Membrane-bound lytic murein transglycosylase.
       0.855
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
     0.764
EAR49600.1
COG3820 Uncharacterized protein conserved in bacteria.
  
     0.763
EAR52623.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.715
atpF-2
FoF1 ATP synthase, subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.707
EAR53039.1
FxsA; COG3030 Protein affecting phage T7 exclusion by the F plasmid.
       0.705
EAR49410.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.704
EAR51235.1
NADH-ubiquinone oxidoreductase family protein.
  
     0.699
EAR49788.1
Hypothetical protein.
  
     0.695
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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