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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR53086.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
EAR53088.1
Hypothetical protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
       0.762
EAR53087.1
GAF domain protein; COG0845 Membrane-fusion protein.
       0.755
EAR53085.1
Type I secretion target repeat protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.693
EAR53090.1
COG0845 Membrane-fusion protein.
       0.503
EAR53089.1
Outer membrane efflux protein, putative; COG1538 Outer membrane protein.
       0.480
EAR53083.1
Proline iminopeptidase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.
       0.402
EAR53084.1
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
       0.402
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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