STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR53123.1Hypothetical protein; COG0438 Glycosyltransferase. (372 aa)    
Predicted Functional Partners:
EAR53126.1
Putative glycosyltransferase protein; COG0438 Glycosyltransferase.
 
    0.955
EAR53121.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
     0.954
EAR53128.1
NAD-dependent dehydratase/epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
     0.953
EAR53122.1
dTDP-glucose 4,6-dehydratase protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
    0.951
EAR53127.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
    0.949
EAR53129.1
Putative oxidoreductase protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
     0.883
EAR53130.1
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
     0.872
EAR53125.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
    
0.863
EAR53124.1
COG4641 Uncharacterized protein conserved in bacteria.
 
    
0.847
EAR53131.1
Hypothetical protein.
 
     0.802
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.