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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR53156.1COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (137 aa)    
Predicted Functional Partners:
EAR53157.1
Probable transporter; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.955
EAR53155.1
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
    0.887
EAR51285.1
Probable ABC transporter permease protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.821
EAR51261.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.803
EAR52555.1
DedA family protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.787
EAR50230.1
Putative permease protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.764
EAR53158.1
Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.741
EAR51281.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.737
EAR51259.1
COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
    0.729
EAR52696.1
TRAP-T family transporter, DctM (12 TMs) subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  0.728
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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