STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49966.1Predicted secreted periplasmic protein; COG0157 Nicotinate-nucleotide pyrophosphorylase. (165 aa)    
Predicted Functional Partners:
leuS
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      0.937
EAR49965.1
Hypothetical protein; COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase.
 
    0.902
EAR49968.1
Hypothetical protein.
 
     0.829
EAR51473.1
Hypothetical protein.
  
     0.737
EAR49923.1
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.707
EAR49604.1
Hypothetical protein.
  
     0.701
EAR50891.1
Hypothetical protein.
  
     0.697
EAR51629.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.660
EAR51723.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.596
EAR52408.1
Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.593
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (22%) [HD]