STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50588.1Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases. (248 aa)    
Predicted Functional Partners:
EAR50587.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
  0.971
EAR50918.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.871
EAR50592.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
 
    0.855
EAR50591.1
COG0395 ABC-type sugar transport system, permease component.
 
    0.850
EAR51105.1
COG3962 Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
 0.821
EAR50589.1
Putative beta-mannosidase protein; COG3250 Beta-galactosidase/beta-glucuronidase.
 
  
  0.805
EAR50593.1
Putative periplasmic binding abc transporter signal peptide protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
    0.786
EAR50590.1
ATP-binding component of ABC transporter (Sugar); COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
     0.777
EAR52880.1
Putative exported oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.763
EAR53134.1
Probable trehalosemaltose utilization protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.758
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.