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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50589.1Putative beta-mannosidase protein; COG3250 Beta-galactosidase/beta-glucuronidase. (788 aa)    
Predicted Functional Partners:
EAR49569.1
Carbohydrate kinase, PfkB; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
   
    0.825
EAR50588.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
  
  0.805
EAR50587.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
  
  0.803
EAR51361.1
Putative glycosyl hydrolase, beta-N-acetylhexosaminidase protein-like; COG3525 N-acetyl-beta-hexosaminidase.
 
 0.780
EAR51959.1
Rhamnosidase A.
 
  0.672
EAR50590.1
ATP-binding component of ABC transporter (Sugar); COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
       0.671
EAR50591.1
COG0395 ABC-type sugar transport system, permease component.
       0.671
EAR50592.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
       0.671
EAR50594.1
COG1609 Transcriptional regulators.
 
     0.644
EAR50593.1
Putative periplasmic binding abc transporter signal peptide protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.533
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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