close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50592.1Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components. (283 aa)    
Predicted Functional Partners:
EAR50591.1
COG0395 ABC-type sugar transport system, permease component.
  0.976
EAR50590.1
ATP-binding component of ABC transporter (Sugar); COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.954
EAR50593.1
Putative periplasmic binding abc transporter signal peptide protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.935
rbsA-2
Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     
  0.900
EAR49731.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.899
EAR49729.1
Probable binding protein component of ABC sugar transporter; COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.881
EAR50588.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
    0.855
EAR50263.1
Maltose transport inner membrane protein; COG3833 ABC-type maltose transport systems, permease component.
 
  0.802
malE
Periplasmic maltose-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
  0.802
EAR50587.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
     0.795
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.