Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EAR50599.1COG4952 Predicted sugar isomerase. (424 aa)    
Predicted Functional Partners:
EAR50600.1
Short chain dehydrogenase.
 
  
  0.981
EAR51907.1
Short-chain dehydrogenase/reductase SDR.
 
  
  0.929
EAR51949.1
Short chain dehydrogenase.
 
  
  0.922
EAR50607.1
Hypothetical protein; COG1070 Sugar (pentulose and hexulose) kinases.
 
  
 0.895
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.823
EAR52610.1
Hypothetical protein; COG3822 ABC-type sugar transport system, auxiliary component.
     
  0.809
EAR49843.1
Putative Fructokinase; COG0524 Sugar kinases, ribokinase family.
     
  0.809
EAR52252.1
COG0837 Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.806
EAR50601.1
COG1349 Transcriptional regulators of sugar metabolism.
 
     0.783
EAR50602.1
Putative periplasmic binding abc transporter protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.745
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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