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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA-2Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (510 aa)    
Predicted Functional Partners:
EAR50604.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.981
EAR50605.1
Putative permease abc transporter protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.981
EAR50602.1
Putative periplasmic binding abc transporter protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.942
EAR52569.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.936
EAR50171.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.924
EAR52527.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.908
EAR51806.1
Ribose ABC transporter, permease protein; COG4158 Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.904
EAR51824.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
  0.904
EAR52526.1
COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
  0.902
EAR50592.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
     
  0.900
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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