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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50628.1COG1652 Uncharacterized protein containing LysM domain. (253 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.777
EAR50154.1
Hypothetical protein.
  
 
   0.678
EAR49772.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
    
   0.622
EAR49658.1
DNA-binding ferritin-like protein; DNA protection during starvation conditions; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
   
    0.593
EAR50629.1
folC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.585
EAR52806.1
Hypothetical protein; COG0655 Multimeric flavodoxin WrbA.
   
    0.579
EAR49567.1
Trp repressor binding protein WrbA, putative; COG0655 Multimeric flavodoxin WrbA.
   
    0.579
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
       0.539
EAR50853.1
Probable osmotically inducible sensory protein; COG2823 Predicted periplasmic or secreted lipoprotein.
  
    0.514
EAR50414.1
Osmotically inducible protein OsmC; COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
    0.495
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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